| CALDER OVID MANUAL WWW
MEDLINE TUTORIAL
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3. Define Your Search Topic and Concepts This is a preparatory step and not part of the database. Analyze your search needs and define your search topic in your own words. State the topic in a well-focused sentence or question. Example: What is the risk of breast cancer for women taking combination hormone replacement therapy? By defining your specific information needs, searching will be accurate and relevant. The next step is to underline the search terms, such as the patient or subject group, problem, intervention, outcome, and/or type of study that will provide the best information. Example: risk, breast cancer, women, hormone therapy.
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The example above shows a search for one keyword. Use the adjacency operator (adj) to retrieve two or more query terms within a number (n) of words of each other and in any order. The number n should immediately follow adj without a space, as in physician adj5 relationship. This search will retrieve the words physician and relationship within 5 words of each other in either direction.
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| 6. Map Term to Subject Heading The "Map Term to Subject Heading" checkbox activates the Ovid mapping feature. When you type your query at the "Main Search Page" and click the "Perform Search" button, you will have the opportunity to select the Medical Subject Headings (MeSH) or controlled vocabulary term(s) that most closely matches your desired concept. Ovid automatically checks the "Tree" for the most appropriate terms and displays those terms in a list. You will also have the opportunity to choose subheadings.
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| 7. Medical Subject Headings (MeSH) The MEDLINE database is indexed by professional reviewers who read each article completely and then assign index terms to describe (as specifically as possible) the contents of the article. The terms come from a standardized list of vocabulary terms and definitions called MeSH (Medical Subject Headings). The idea behind MeSH is that all articles about the same concept are assigned the same standard subject heading, regardless of the exact words the author uses. For example, one author may use shingles, the other herpes zoster, but both articles will be indexed to herpes zoster. The best way to search MEDLINE is to use the MeSH terms.
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When you click the "Author" icon to search for documents written by a certain person, the phrase above the command line box changes to "Enter the Author's last name, a space, and first initial if known." Anything typed at the author prompt will be searched only in the Author (au) field of the database. The Ovid databases are not case-sensitive; therefore, you do not need to capitalize terms or names.
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When you click the "Title" icon on the "Main Search Page," you can search for articles that contain your desired word or phrase in the Title field. Note that the "Main Search Page" command line prompt has changed to "Enter a word or phrase to be searched in the title." Anything typed at the title prompt will be searched only in the Title (ti) field of the database.
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When you click the "Journal" icon on the "Main Search Page," you can search for articles that appeared in a desired journal. Note that the "Main Search Page" command line prompt has changed to reflect a journal search. Anything typed at the journal prompt will be searched only in the Journal (jn) field of the database.
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Truncation is used to ensure retrieval of all possible variations of a term.
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Many Ovid commands may be entered directly in the command line box. This lets advanced users bypass the icons displayed at the top of the "Main Search Page" to save time. The list below explains the most frequently-used commands. You may use uppercase or lowercase letters. Be sure to observe the correct number of periods and their placement. Consult the "Database Field Guides" for more information (from the "Choose a Database" screen, click on the "i" icon in front of each database to access the field guide OR from the "Main Search Page," click on the "Help" button and then on the "Command Line Syntax and Advanced Searching Techniques" hyperlink):
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"Search Fields/Indexes" screen:
The "Search History" window shows the last four sets you have created. When you click the "Perform Search" button on the "Main Search Page," results appear immediately, usually in groups of 10 article citations at a time. The "Titles" display begins immediately below the search interface, and you can scroll down to see it. The "Titles" display starts with a section heading that contains the results of your search, the number of citations retrieved, and the range of currently-displayed items (e.g., 1-10, 11-20, etc.) Several or all of the following links appear at the end of each citation, allowing you to display more information:
"Titles" display screen:
If you would like to view only selected articles, click in the checkbox to the left of the desired articles. Ovid will retain your selections, so you can use the "Previous Citation(s)" and "Next Citation(s)" buttons to navigate page-by-page through the "Titles" display. When finished, click on the "Main Search Page" button. Your chosen citations will appear as a separate set in the "Search History" window. Later, you could choose to print, email, or save (to floppy diskette) those citations.
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Every time you click the "Perform Search" button, Ovid keeps a record of your search in the "Search History" window. Each search (also known as a set) is numbered consecutively in the "#" column. The number of documents retrieved by each search is listed in the "Results" column. Once you have created a search, a new column appears, called "Display." Click the "Display" link to view the results of any search. Via the command line box, you can refer to any search in a new query by typing its set number.
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| 16. Expand/Contract Search History The "Search History" window shows your last four searches by default. If you have performed more than four searches in your current session, click the "Expand" search history button to view them all. The "Expand" button will then change to the "Contract" search history button. If you decide to display only the last four searches, click on the "Contract" search history button.
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| 17. Saving and Retrieving Searches, Copying Searches and AutoAlerts (SDIs)
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You can delete selected sets in the "Search History" window or delete the search entirely.
"Delete Searches" screen:
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Find everything about the topic (may include some irrelevant items). In a broad search, use fewer key concepts or search statements to increase the number of article hits.
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Find a few good references on the topic (may miss some relevant items). In a narrow search, use more key concepts and complex search statements to retrieve fewer articles. Search results are often further restricted by applying limits such as age groups, gender, language, publication types, etc.
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Click the "Tools" icon at the top of the "Main Search Page" to activate the special searching capabilities of this database, including Medical Subject Headings (MeSH). Tools include the "Tree," "Permuted Index," "Scope Note," "Explode," and "Subheadings." On this page, click the button for the tool you wish to use, enter the desired keyword, and click the "Perform Search" button. Because they are designed according to the database structure, "Tools" can be used to learn more about database design and for shortcuts to certain structural elements in the database. Note: the "Tools" feature is not available in every database.
"Select a Tool to View" screen:
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In databases such as MEDLINE, CINAHL, etc., index terms are arranged in a hierarchy, with broader concepts such as "Wounds and Injuries" near the top, and more specific terms like "Spinal Cord Injuries" near the bottom. The hierarchy of terms is known as a "Tree." You can browse through as much of the "Tree" as you wish, looking for terms to add to your search.
"Tree" display screen:
The same MeSH term may appear in different contexts. To view all occurrences of your term, click on the "Contexts" button. From there, you may find other terms to search. Note: your MEDLINE search will retrieve all occurrences of your MeSH term, even if it is in different trees. You can make your selections from this screen or use your browser's "Back" button (or click on the "Full Tree" button) and make your selections from the "Tree" display screen. "Contexts" display screen:
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The "Permuted Index" does a keyword search for Medical Subject Headings (MeSH). Use this feature to learn of MeSH related to your subject. Note: the "Permuted Index" will allow you to search with a single term only. For example, searching with the term "Spinal" will locate all MeSH containing it, such as "Spinal Cord Neoplasms, " "Anterior Spinal Artery Syndrome, " and "Spinal Cord Injuries. "
"Select a Tool to View" screen:
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A "Scope Note" contains information about the use of a MeSH term. This information may be a simple definition of the term, or it may consist of very detailed instructions to the searcher on how to apply the term. Some of the details may be in a form that is not easily understood by a non-indexer, but often there is very useful information that can be found by scanning a lengthy "Scope Note."
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| If you wish to only retrieve articles where the MeSH term you selected is the major subject being discussed, click in the "Focus" checkbox to the right of the term. However, this is not recommended for most searches unless the amount retrieved will likely be very large. Click on the "Continue" button to proceed to the next search step, choosing a subheading.
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| 27. Explode and Focus Simultaneously You can explode and focus. For example, exploding "Spinal Cord Injuries" will also retrieve "Central Cord Syndrome." If you also clicked "Focus", you would retrieve articles in which either or both term(s) is/are the major subject(s) of the article.
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Databases indexed with MeSH headings have a list of qualifiers, called subheadings, which can be used to fine-tune or narrow a search. Subheadings tend to be general concepts such as "etiology" or "toxicology," which, when linked to MeSH terms, give a very specific idea of what an article is about. For example, an article about "the medical complications of spinal cord injuries" would be assigned the MeSH term "Spinal Cord Injuries" and the subheading "complications." In the document, the MeSH term and subheading would display together, separated by a slash: "Spinal Cord Injuries/co [Complications]."
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Use floating subheadings when you wish to retrieve articles about that subheading. For example, to indirectly answer the question, "what parts of the body does smoking affect?" combine the MeSH term and subheading, "Smoking/ae [Adverse Effects]," with the floating subheadings "etiology (et)" or "chemically-induced (ci)." Thus, you would retrieve articles on various diseases (such as peptic ulcers, neoplasms, and osteoporosis) that were caused by smoking. As you can see, floating subheadings will attach to any MeSH term, so you may retrieve some irrelevant articles.
Like MeSH terms, you can explode floating subheadings. Exploding the subheading "statistics and numerical data (sn)" would include all of its related subheadings, "ethnology (eh), "epidemiology (ep)," and "mortality (mo)." Instead of typing those terms separately as floating subheadings, you can type "sn.xs." in the command line box on the "Main Search Page." Note that the floating subheadings will be attached to at least one MeSH term used to describe the article. They will not necessarily be attached to the particular subject heading you used in your search. Therefore, you may retrieve some articles irrelevant to your search.
See the chart in step 28, Subheadings, for the categories and contents for each of the 20 exploded subheadings. Each entry is preceded by its two-character abbreviation. The first heading listed defines the category.
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When you click the "Combine" icon on the "Main Search Page," you can create a new search set that represents the intersection (AND) or union (OR) of two or more of the previously-created sets. You must have at least two sets in your search history to use the "Combine" feature. Combining the key concepts in your search topic with the Boolean connectors OR or AND enables you to formulate your search statement in language that will be interpreted by the system as follows. OR retrieves documents that discuss either concept, and is used to connect synonyms or related concepts and to increase retrieval. AND retrieves documents that discuss both concepts and is used to restrict retrieval.
For example, if you would like to combine sets #1 and #2, you can use the AND, OR, or NOT operators. Your statement will be processed from left to right, unless you specify another order via parentheses. Examples:
Note: items in parenthesis are processed first and capitalization is not required.
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"Choose a Database" screen:
"Change Database" screen:
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You can limit your search statement prior to clicking on the "Perform Search" button by selecting one of more of the following limits: Human: articles which are primarily about human subjects. It will retain articles about both human and animal subjects. If you limit by Age Group you do not need to use this limit. English Language: articles which are written in the English language. Foreign language articles with English abstracts will be eliminated. Review Articles: articles which are reviews of a subject. Includes all review types: Review Literature; Review of Reported Cases; Review, Academic; Review, Multicase; and Review, Tutorial. Abstracts: restricts retrieval to documents which include an abstract. All abstracts included in MEDLINE are in English and were written by the author(s) of the original article. Will include foreign language articles with English abstracts. EBM Reviews: articles or studies that have been included by the Cochrane Collaboration when creating a Topic Review or articles that have been reviewed in the ACP Journal Club or BMJ Evidence-Based Medicine publications or in the Database of Abstracts of Reviews of Effectiveness (DARE). By their inclusion in these publications, these studies have met strict Evidence-Based Medicine criteria. Latest Update: articles which were most recently added to the database. AIDS, Bioethics, Cancer, Complementary Medicine, History of Medicine, Space Life Sciences, Systematic Reviews, or Toxicology: restricts retrieval to these areas. Publication Year: restricts retrieval to any of the years covered by this segment of MEDLINE.
"Limit a Search" screen:
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| 33. Filtering for Evidence-Based Medicine (EBM) To identify the top-level, best-available research articles for clinical decision-making and practice, filter your retrieval for original articles that are evidence-based, and not just opinion papers, case reports, or secondary review papers. This filtering is done by narrowing your retrieval to the Medical Subject Headings (MeSH) or publication types listed at the end of this section. Some of the terms and types are appropriate when searching for evidence-based articles on therapy-related topics. Others should be used when searching for evidence-based articles on diagnostic tests and procedures, etiology, or prognosis. You can also limit your search to "EBM Reviews" by clicking in the checkbox located under the command line box, or by clicking on the "Limit" icon and then in the checkbox for "Evidence Based Medicine Reviews." (Note: there are other article reviews options from "Limit a Search" screen. Click on the "i" to the left of the checkbox to read the scope of each.) When you limit your search to the "EBM Reviews" you will get the highest-quality review articles, but perhaps very few or not on every topic. Using the filters described below will net you more EBM articles. Searching with a group of specific MeSH terms and unique keywords can act as a filter or hedge to find the best articles for answering a clinical problem. The better articles would be those whose results are based on scientific evidence. After setting up a filter for either "therapy," "diagnosis," "etiology," or "prognosis," a search can be added in MEDLINE to sift through the list and retrieve the evidence-based articles. Individual filters can be saved on Ovid as permanently-saved searches for further use. The following examples are largely based on searches developed by Ann McKibbon and Cindy Walker-Dilks of McMaster University in Hamilton, Ontario, Canada. |

The first strategy will filter the articles on using anticoagulants in patients with atrial fibrillation. This filter uses EBM terms for therapy articles that are based on clinical trials and contain evidence-based information. Using the full hedge (or/1-26) retrieved 73 articles; the abbreviated hedge (7 or 25 or 26) retrieved 34 articles. Therapy strategy 1: EBM filters
The second strategy, shown below, will filter the articles retrieved in search set #3 by using the "EBM Reviews" limit located under the command line box. This strategy yielded six articles. You may need to drop subheadings and use MeSH terms without restricting to focus to find evidence-based medicine reviews. After the system displays the set of articles limited to "EBM Reviews," the records may have the following unique options highlighted. Click on your choice:
Therapy strategy 2: "EBM Reviews" limit
(Once again, refer to the figures.) The first strategy will search for articles on diagnosing Alzheimer Disease by filtering to those that contain evidence-based information essential to selecting the best possible diagnostic methods for a patient. Diagnosis strategy 1: EBM filters
The second strategy utilizing the "EBM Reviews" limit located only one article in this example. This illustrates the potential weakness of relying on the "EBM Reviews" limit function. Diagnosis strategy 2: "EBM Reviews" limit
The first strategy will search for articles that discuss the causes of heart disease, including chemically-induced causes, by filtering to those that contain evidence-based information on its etiology. Etiology strategy 1: EBM filters
The second strategy, which "focused" the MeSH term and utilized the "EBM Reviews" limit, located only two articles in this example. You may want to re-enter your search term at the command line prompt and not select the "Focus" option in order to retrieve more evidence-based medicine reviews. Etiology strategy 2: "EBM Reviews" limit
This strategy will narrow articles on hypertension to those that contain evidence-based information on the prognosis of the disease. The first strategy utilizing EBM filters netted a choice of 273 or 58 articles compared with the second strategy of the "EBM Reviews" limit of only seven articles. Prognosis strategy 1: EBM filters
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Once you have the desired citations as your most recent set in the Search History, scroll down to the "Citation Manager," which is located at the bottom of the screen. Make selections from the options provided to print, email, or save (to floppy diskette).
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35. Timeout and Session Recovery If you have 10 minutes of inactivity, your Ovid search session will be terminated. If this happens, exit the current screen and re-enter via the Calder Library homepage (http://calder.med.miami.edu) to log in again.
If you had initially logged in with your user ID and password, you will be reminded that your user ID is still in use. Even though it prompts you, do not enter your user ID and password from the Ovid screen--it will not work. You will have to exit that screen, wait 10 or 15 minutes, and then try to log in again from the Calder Library homepage. If you are still experiencing difficulty, please contact the Systems Department at 305-243-5530. (If you don't want to wait, you can choose the "I.P. (Internet Protocol)" option from the Calder log in page, but you won't have access to your interrupted search, and you will not be able to save your search history.)
If you originally logged in via "Password," you would get the following screen where you have the option to resume your interrupted search or to start a new search. Note: this option is ONLY available when you initially log in via "Password" and re-log in via "Password."
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Click the "Logoff" button when you are done searching. You should log off so others can access the database and to allow you to re-enter the database without delay. Note: if you do not log off and try to log in via your user ID and password, you will be unable to do so for 10 or 15 minutes. This is why you should always log off.
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